Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015946081.1_cds_XP_016488357.1_78999
CDS Infomation

[gene=LOC107808361] [db_xref=GeneID:107808361] [protein=E3 ubiquitin protein ligase DRIP1-like] [protein_id=XP_016488357.1] [location=complement(join(18614..18793,18877..18949,19267..19317,19435..19946,20658..21054,22011..22043,22141..22247))] [gbkey=CDS]
Sequence

ATGCATTGTAATAAACTAAAATGGTACTGGCTATTTGGATCTGGTTTTGAGCTGAAGATT
TTGACAATGTTGAGCAAAGTTGCTGATATTGTTTTAGTTTGCATGGATCTCACGGCACCT
GTGCTGGTGGGAAGTAGAAGGCCTGATAACCAAGTCCAAGAGATCCGCGACATATTCTCT
AATAGAAGAAAAGAATACATTGAGCGTGGAATAATTGAAGGAAACTCCAAAAAAGGCGAA
AGCAAAAAGGTTGCTGAGGATAATAATGCCATGCTTATTGATAATCCATTGCCTGCTACT
AGCTCAAGGATAAAGGAGAAGTCAATCTCTTCCTTAGTGAGTACTAAACCTGAAGTTTCA
AATAATCAGAACGTTCCGAGTGGAAGAAGAAAAGGCCACGTTCGAAATGCTAATGCTCCT
CGTTTTCAAGATCCAATTAAATTTGATCTTAATGTTGAGCACAAGTTAAAGGGAGATCAG
TCTGGAAGTTCAAGTACTCCTCTTCTTTCAGGCAAAGCTACTCAAAATAAAGAACAGGTG
GAGAGTGCAGCTGAGACCTCAAAGAATGATATCTCAAAGAAACCTACTCCAAGAAAAGGT
GAACCGTTGGATGGTATGAATGACCTATGGGAACCACTAAATACCTTGGTAATTAAAGGT
GTGAGTTTAGGCAATTCCAACAAATCCAAGTCCACAGAGCCTGCCTCAAACTTCGCTCCA
ATAGTCAATCTTGAAGATGAAGACGAAGAAGAAGATGATGAAGATGATGAAGAGTACGTC
CCTTCTAAAACAAAGGAACACAAAGTTAGCAAACCAAATGTTCAAAAAGAGGAAACTAGA
TCAACTAATATTCCAGCTGCAGCACCATCAAGTACTTCAGGAAAAGGCAAAAAGGGACGC
CGTGGCAGAAAGAAAAAAGAAACACTTCCCTCTGGTGGCGGATCAAGTAATGCGCCTGAA
GTACGAGTTACTAATGAGGCCACAAGCAGCAGCAGAAAGAATGAAAGAACCAGCCCTATT
TGGTTTACTCTAGTTGCATCTGATAAACAGGAAAGTCCTTCACCTTTGCCACAGATTCCT
TCCCGCTACATAAAGATCAAGGATGTGAATATGCCCGCTTCGTACATAAAGAAGTATCTT
GCACAAAAACTGAGTCTCCAGAGCGAAGACGAGGTGGAGATTCGCATGTTAGGCCTTCCG
ATTCTTCCTGCATTGCCATTGTACCGACTAGTAGAGCTGTGGTTACGTGCAGCACCAAGC
TCAGAAATTAGAAAGGCAAAAGTGGGAGGTTCTGCCAAAGATTTTGTGATGGTTTTGACA
TATTCTCGCAACCTTAGACCTCAGCCTCATTGA

Peptide Sequence

PEP ID

XP_016488357.1
PEP Infomation

PREDICTED: E3 ubiquitin protein ligase DRIP1-like [Nicotiana tabacum]
Sequence

MHCNKLKWYWLFGSGFELKILTMLSKVADIVLVCMDLTAPVLVGSRRPDNQVQEIRDIFS
NRRKEYIERGIIEGNSKKGESKKVAEDNNAMLIDNPLPATSSRIKEKSISSLVSTKPEVS
NNQNVPSGRRKGHVRNANAPRFQDPIKFDLNVEHKLKGDQSGSSSTPLLSGKATQNKEQV
ESAAETSKNDISKKPTPRKGEPLDGMNDLWEPLNTLVIKGVSLGNSNKSKSTEPASNFAP
IVNLEDEDEEEDDEDDEEYVPSKTKEHKVSKPNVQKEETRSTNIPAAAPSSTSGKGKKGR
RGRKKKETLPSGGGSSNAPEVRVTNEATSSSRKNERTSPIWFTLVASDKQESPSPLPQIP
SRYIKIKDVNMPASYIKKYLAQKLSLQSEDEVEIRMLGLPILPALPLYRLVELWLRAAPS
SEIRKAKVGGSAKDFVMVLTYSRNLRPQPH

Transcript Sequence

Gene sequence data has not been registered.